Package jdistlib.inference

Class SubsetSelectionTarget

java.lang.Object

jdistlib.inference.SubsetSelectionTarget

All Implemented Interfaces:

ReversibleJumpInclusionTarget, ReversibleJumpTarget

public final class SubsetSelectionTarget
extends Object
implements ReversibleJumpInclusionTarget

Bit-mask model family for Java-only covariate, locus, or feature selection.

Constructor Summary

Constructors

Constructor	Description
SubsetSelectionTarget(String[] commonParameterNames, String[] candidateNames, SubsetLogJoint logJoint)

Method Summary

Modifier and Type	Method	Description
boolean	active(long modelId, int candidate)
int[]	activeCandidates(long modelId)
int	candidateCount()
String	candidateName(int candidate)
String[]	candidateNames()
int	commonDimension()
String[]	commonParameterNames()
double	logJoint(ReversibleJumpState state)
String	modelName(long modelId)
ReversibleJumpModelSpace	modelSpace(long modelId)
int	parameterIndex(long modelId, int candidate)
ReversibleJumpState	state(long modelId, double[] commonParameters, double[] activeCoefficients)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface jdistlib.inference.ReversibleJumpTarget

fixedModelTarget

Constructor Details

SubsetSelectionTarget

public SubsetSelectionTarget(String[] commonParameterNames,
 String[] candidateNames,
 SubsetLogJoint logJoint)

Method Details

modelSpace

public ReversibleJumpModelSpace modelSpace(long modelId)

Specified by:

modelSpace in interface ReversibleJumpTarget

logJoint

public double logJoint(ReversibleJumpState state)

Specified by:

logJoint in interface ReversibleJumpTarget

state

public ReversibleJumpState state(long modelId,
 double[] commonParameters,
 double[] activeCoefficients)

candidateCount

public int candidateCount()

commonDimension

public int commonDimension()

candidateName

public String candidateName(int candidate)

candidateNames

public String[] candidateNames()

Specified by:

candidateNames in interface ReversibleJumpInclusionTarget

commonParameterNames

public String[] commonParameterNames()

active

public boolean active(long modelId,
 int candidate)

Specified by:

active in interface ReversibleJumpInclusionTarget

activeCandidates

public int[] activeCandidates(long modelId)

parameterIndex

public int parameterIndex(long modelId,
 int candidate)

modelName

public String modelName(long modelId)